Profiles¶
List engines / profiles:
| Profile | Purpose |
|---|---|
core |
FastSurfer VINN + CC + Cereb + Hyp + recon-surf |
core-lesion |
Default lesion path: LIT fill → core → lit-post |
core-lesion-native |
Native --lesion_mask (no seg/surf split) |
seg-quick |
--seg_only --tal_reg (volume + talairach) |
seg-quick-synthseg |
SynthSeg volume alt |
strip / register-* / bias-deepn4 |
Utilities |
fs-long, subfields-ha, nuclei-bs-thal |
FS gap-fills |
fs-clinical, preprocess-synthsr |
Odd contrast / salvage |
atlas-*, --atlas dk |
Extra parc |
structure-claustrum, structure-hippunfold, … |
Specialty |
surf-dl-topofit* |
TopoFit WM (gate: passed machine check) |
surf-dl-v2c, sphere-sugar, thickness-fast |
Still gated open |
Experimental profiles need a passed gate or --allow-experimental.